helmholtz.py

# Copyright (C) 2007 Andreas Kloeckner
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program.  If not, see <http://www.gnu.org/licenses/>.




from __future__ import division
from __future__ import absolute_import
from __future__ import print_function
import numpy
import numpy.linalg as la
from grudge.tools import Reflection, Rotation



class ResidualPrinter:
    def __init__(self, compute_resid=None):
        self.count = 0
        self.compute_resid = compute_resid

    def __call__(self, cur_sol):
        import sys

        if cur_sol is not None:
            if self.count % 20 == 0:
                sys.stdout.write("IT %8d %g                 \r" % (
                    self.count, la.norm(self.compute_resid(cur_sol))))
        else:
            sys.stdout.write("IT %8d                    \r" % self.count)
        self.count += 1
        sys.stdout.flush()




def main(write_output=True):
    from grudge.data import GivenFunction, ConstantGivenFunction

    from grudge.backends import guess_run_context
    rcon = guess_run_context()

    dim = 2

    def boundary_tagger(fvi, el, fn, points):
        from math import atan2, pi
        normal = el.face_normals[fn]
        if -90/180*pi < atan2(normal[1], normal[0]) < 90/180*pi:
            return ["neumann"]
        else:
            return ["dirichlet"]

    def dirichlet_boundary_tagger(fvi, el, fn, points):
            return ["dirichlet"]

    if dim == 2:
        if rcon.is_head_rank:
            from grudge.mesh.generator import make_disk_mesh
            mesh = make_disk_mesh(r=0.5, 
                    boundary_tagger=dirichlet_boundary_tagger,
                    max_area=1e-3)
    elif dim == 3:
        if rcon.is_head_rank:
            from grudge.mesh.generator import make_ball_mesh
            mesh = make_ball_mesh(max_volume=0.0001,
                    boundary_tagger=lambda fvi, el, fn, points:
                    ["dirichlet"])
    else:
        raise RuntimeError("bad number of dimensions")

    if rcon.is_head_rank:
        print("%d elements" % len(mesh.elements))
        mesh_data = rcon.distribute_mesh(mesh)
    else:
        mesh_data = rcon.receive_mesh()

    discr = rcon.make_discretization(mesh_data, order=5, 
            debug=[])

    def dirichlet_bc(x, el):
        from math import sin
        return sin(10*x[0])

    def rhs_c(x, el):
        if la.norm(x) < 0.1:
            return 1000
        else:
            return 0

    def my_diff_tensor():
        result = numpy.eye(dim)
        result[0,0] = 0.1
        return result

    try:
        from grudge.models.poisson import (
                PoissonOperator,
                HelmholtzOperator)
        from grudge.second_order import \
                IPDGSecondDerivative, LDGSecondDerivative, \
                StabilizedCentralSecondDerivative

        k = 1

        from grudge.mesh import BTAG_NONE, BTAG_ALL
        op = HelmholtzOperator(k, discr.dimensions, 
                #diffusion_tensor=my_diff_tensor(),

                #dirichlet_tag="dirichlet",
                #neumann_tag="neumann", 

                dirichlet_tag=BTAG_ALL,
                neumann_tag=BTAG_NONE, 

                #dirichlet_tag=BTAG_ALL,
                #neumann_tag=BTAG_NONE, 

                #dirichlet_bc=GivenFunction(dirichlet_bc),
                dirichlet_bc=ConstantGivenFunction(0),
                neumann_bc=ConstantGivenFunction(-10),

                scheme=StabilizedCentralSecondDerivative(),
                #scheme=LDGSecondDerivative(),
                #scheme=IPDGSecondDerivative(),
                )
        bound_op = op.bind(discr)

        if False:
            from grudge.iterative import parallel_cg
            u = -parallel_cg(rcon, -bound_op, 
                    bound_op.prepare_rhs(discr.interpolate_volume_function(rhs_c)), 
                    debug=20, tol=5e-4,
                    dot=discr.nodewise_dot_product,
                    x=discr.volume_zeros())
        else:
            rhs = bound_op.prepare_rhs(discr.interpolate_volume_function(rhs_c))
            def compute_resid(x):
                return bound_op(x)-rhs

            from scipy.sparse.linalg import minres, LinearOperator
            u, info = minres(
                    LinearOperator(
                        (len(discr), len(discr)),
                        matvec=bound_op, dtype=bound_op.dtype),
                    rhs,
                    callback=ResidualPrinter(compute_resid),
                    tol=1e-5)
            print()
            if info != 0:
                raise RuntimeError("gmres reported error %d" % info)
            print("finished gmres")

            print(la.norm(bound_op(u)-rhs)/la.norm(rhs))

        if write_output:
            from grudge.visualization import SiloVisualizer, VtkVisualizer
            vis = VtkVisualizer(discr, rcon)
            visf = vis.make_file("fld")
            vis.add_data(visf, [ ("sol", discr.convert_volume(u, kind="numpy")), ])
            visf.close()
    finally:
        discr.close()





if __name__ == "__main__":
    main()