diff --git a/meshmode/mesh/refinement/utils.py b/meshmode/mesh/refinement/utils.py index d34fa14afeeb8edc8d8e1574cdc0dfc8d4f3808d..936f91078d8be425b65aed46b727880e298f5965 100644 --- a/meshmode/mesh/refinement/utils.py +++ b/meshmode/mesh/refinement/utils.py @@ -80,7 +80,7 @@ def check_nodal_adj_against_geometry(mesh, tol=1e-12): nearby_origin_vertex = mesh.vertices[ :, nearby_grp.vertex_indices[nearby_iel][0]] # noqa transformation = np.empty( - (mesh.ambient_dim, mesh.ambient_dim)) + (len(mesh.vertices), nvertices_per_element-1)) vertex_transformed = vertex - nearby_origin_vertex for inearby_vertex_index, nearby_vertex_index in enumerate( @@ -88,10 +88,17 @@ def check_nodal_adj_against_geometry(mesh, tol=1e-12): nearby_vertex = mesh.vertices[:, nearby_vertex_index] transformation[:, inearby_vertex_index] = \ nearby_vertex - nearby_origin_vertex - bary_coord = np.linalg.solve(transformation, vertex_transformed) + bary_coord, residual = \ + np.linalg.lstsq(transformation, vertex_transformed)[0:2] + + is_in_element_span = ( + residual.size == 0 or + np.linalg.norm(vertex_transformed) == 0 or + residual / np.linalg.norm(vertex_transformed) <= tol) is_connected = ( - np.sum(bary_coord) <= 1+tol + is_in_element_span + and np.sum(bary_coord) <= 1+tol and (bary_coord >= -tol).all()) el1 = group_and_iel_to_global_iel(nearby_igrp, nearby_iel) el2 = group_and_iel_to_global_iel(igrp, iel_grp) diff --git a/test/test_refinement.py b/test/test_refinement.py index fca3aa9381eac1ec2e392c0e6d0e5e4f307499d3..bed61eb94c900db0f78b526cfe43ffababe4d825 100644 --- a/test/test_refinement.py +++ b/test/test_refinement.py @@ -84,8 +84,8 @@ def uniform_refine_flags(mesh): partial( make_curve_mesh, partial(ellipse, 3), - np.linspace(0, 1, 20), - order=2), + np.linspace(0, 1, 21), + order=1), uniform_refine_flags, 4),