__copyright__ = "Copyright (C) 2021 University of Illinois Board of Trustees" __license__ = """ Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. """ import logging import numpy as np import pytest import meshmode.mesh.generation as mgen from arraycontext import pytest_generate_tests_for_array_contexts from meshmode.discretization.poly_element import ( InterpolatoryEdgeClusteredGroupFactory, QuadratureGroupFactory, ) from meshmode.mesh import BTAG_ALL from pytools.obj_array import make_obj_array from grudge import geometry, op from grudge.array_context import PytestPyOpenCLArrayContextFactory from grudge.discretization import make_discretization_collection from grudge.dof_desc import ( DISCR_TAG_BASE, DISCR_TAG_QUAD, DTAG_VOLUME_ALL, FACE_RESTR_ALL, VTAG_ALL, BoundaryDomainTag, as_dofdesc, ) from grudge.trace_pair import bv_trace_pair logger = logging.getLogger(__name__) pytest_generate_tests = pytest_generate_tests_for_array_contexts( [PytestPyOpenCLArrayContextFactory]) # {{{ gradient @pytest.mark.parametrize("form", ["strong", "weak", "weak-overint"]) @pytest.mark.parametrize("dim", [1, 2, 3]) @pytest.mark.parametrize("order", [2, 3]) @pytest.mark.parametrize("warp_mesh", [False, True]) @pytest.mark.parametrize(("vectorize", "nested"), [ (False, False), (True, False), (True, True) ]) def test_gradient(actx_factory, form, dim, order, vectorize, nested, warp_mesh, visualize=False): actx = actx_factory() from pytools.convergence import EOCRecorder eoc_rec = EOCRecorder() for n in [8, 12, 16] if warp_mesh else [4, 6, 8]: if warp_mesh: if dim == 1: pytest.skip("warped mesh in 1D not implemented") mesh = mgen.generate_warped_rect_mesh( dim=dim, order=order, nelements_side=n) else: mesh = mgen.generate_regular_rect_mesh( a=(-1,)*dim, b=(1,)*dim, nelements_per_axis=(n,)*dim) dcoll = make_discretization_collection( actx, mesh, discr_tag_to_group_factory={ DISCR_TAG_BASE: InterpolatoryEdgeClusteredGroupFactory(order), DISCR_TAG_QUAD: QuadratureGroupFactory(3 * order) }) def f(x): result = 1 for i in range(dim-1): result = result * actx.np.sin(np.pi*x[i]) result = result * actx.np.cos(np.pi/2*x[dim-1]) return result def grad_f(x): result = make_obj_array([1 for _ in range(dim)]) for i in range(dim-1): for j in range(i): result[i] = result[i] * actx.np.sin(np.pi*x[j]) result[i] = result[i] * np.pi*actx.np.cos(np.pi*x[i]) for j in range(i+1, dim-1): result[i] = result[i] * actx.np.sin(np.pi*x[j]) result[i] = result[i] * actx.np.cos(np.pi/2*x[dim-1]) for j in range(dim-1): result[dim-1] = result[dim-1] * actx.np.sin(np.pi*x[j]) result[dim-1] = result[dim-1] * (-np.pi/2*actx.np.sin(np.pi/2*x[dim-1])) return result def vectorize_if_requested(vec): if vectorize: return make_obj_array([(i+1)*vec for i in range(dim)]) else: return vec def get_flux(u_tpair, dcoll=dcoll): dd = u_tpair.dd dd_allfaces = dd.with_domain_tag( BoundaryDomainTag(FACE_RESTR_ALL, VTAG_ALL) ) normal = geometry.normal(actx, dcoll, dd) u_avg = u_tpair.avg if vectorize: if nested: flux = make_obj_array([u_avg_i * normal for u_avg_i in u_avg]) else: flux = np.outer(u_avg, normal) else: flux = u_avg * normal return op.project(dcoll, dd, dd_allfaces, flux) x = actx.thaw(dcoll.nodes()) u = vectorize_if_requested(f(x)) bdry_dd_base = as_dofdesc(BTAG_ALL) bdry_x = actx.thaw(dcoll.nodes(bdry_dd_base)) bdry_u = vectorize_if_requested(f(bdry_x)) if form == "strong": grad_u = ( op.local_grad(dcoll, u, nested=nested) # No flux terms because u doesn't have inter-el jumps ) elif form.startswith("weak"): assert form in ["weak", "weak-overint"] if "overint" in form: quad_discr_tag = DISCR_TAG_QUAD else: quad_discr_tag = DISCR_TAG_BASE allfaces_dd_base = as_dofdesc(FACE_RESTR_ALL, quad_discr_tag) vol_dd_base = as_dofdesc(DTAG_VOLUME_ALL) vol_dd_quad = vol_dd_base.with_discr_tag(quad_discr_tag) bdry_dd_quad = bdry_dd_base.with_discr_tag(quad_discr_tag) allfaces_dd_quad = allfaces_dd_base.with_discr_tag(quad_discr_tag) grad_u = op.inverse_mass(dcoll, -op.weak_local_grad(dcoll, vol_dd_quad, op.project(dcoll, vol_dd_base, vol_dd_quad, u), nested=nested) + op.face_mass(dcoll, allfaces_dd_quad, sum(get_flux( op.project_tracepair(dcoll, allfaces_dd_quad, utpair)) for utpair in op.interior_trace_pairs( dcoll, u, volume_dd=vol_dd_base)) + get_flux( op.project_tracepair(dcoll, bdry_dd_quad, bv_trace_pair(dcoll, bdry_dd_base, u, bdry_u))) ) ) else: raise ValueError("Invalid form argument.") if vectorize: expected_grad_u = make_obj_array( [(i+1)*grad_f(x) for i in range(dim)]) if not nested: expected_grad_u = np.stack(expected_grad_u, axis=0) else: expected_grad_u = grad_f(x) if visualize: # the code below does not handle the vectorized case assert not vectorize from grudge.shortcuts import make_visualizer vis = make_visualizer(dcoll, vis_order=order if dim == 3 else dim+3) filename = (f"test_gradient_{form}_{dim}_{order}" f"{'_vec' if vectorize else ''}{'_nested' if nested else ''}.vtu") vis.write_vtk_file(filename, [ ("u", u), ("grad_u", grad_u), ("expected_grad_u", expected_grad_u), ], overwrite=True) rel_linf_err = actx.to_numpy( op.norm(dcoll, grad_u - expected_grad_u, np.inf) / op.norm(dcoll, expected_grad_u, np.inf)) eoc_rec.add_data_point(1./n, rel_linf_err) print("L^inf error:") print(eoc_rec) assert (eoc_rec.order_estimate() >= order - 0.5 or eoc_rec.max_error() < 1e-11) # }}} # {{{ divergence @pytest.mark.parametrize("form", ["strong", "weak"]) @pytest.mark.parametrize("dim", [1, 2, 3]) @pytest.mark.parametrize("order", [2, 3]) @pytest.mark.parametrize(("vectorize", "nested"), [ (False, False), (True, False), (True, True) ]) def test_divergence(actx_factory, form, dim, order, vectorize, nested, visualize=False): actx = actx_factory() from pytools.convergence import EOCRecorder eoc_rec = EOCRecorder() for n in [4, 6, 8]: mesh = mgen.generate_regular_rect_mesh( a=(-1,)*dim, b=(1,)*dim, nelements_per_axis=(n,)*dim) dcoll = make_discretization_collection(actx, mesh, order=order) def f(x, dcoll=dcoll): result = make_obj_array([dcoll.zeros(actx) + (i+1) for i in range(dim)]) for i in range(dim-1): result = result * actx.np.sin(np.pi*x[i]) result = result * actx.np.cos(np.pi/2*x[dim-1]) return result def div_f(x, dcoll=dcoll): result = dcoll.zeros(actx) for i in range(dim-1): deriv = dcoll.zeros(actx) + (i+1) for j in range(i): deriv = deriv * actx.np.sin(np.pi*x[j]) deriv = deriv * np.pi*actx.np.cos(np.pi*x[i]) for j in range(i+1, dim-1): deriv = deriv * actx.np.sin(np.pi*x[j]) deriv = deriv * actx.np.cos(np.pi/2*x[dim-1]) result = result + deriv deriv = dcoll.zeros(actx) + dim for j in range(dim-1): deriv = deriv * actx.np.sin(np.pi*x[j]) deriv = deriv * (-np.pi/2*actx.np.sin(np.pi/2*x[dim-1])) result = result + deriv return result x = actx.thaw(dcoll.nodes()) if vectorize: u = make_obj_array([(i+1)*f(x) for i in range(dim)]) if not nested: u = np.stack(u, axis=0) else: u = f(x) def get_flux(u_tpair, dcoll=dcoll): dd = u_tpair.dd dd_allfaces = dd.with_domain_tag( BoundaryDomainTag(FACE_RESTR_ALL, VTAG_ALL) ) normal = geometry.normal(actx, dcoll, dd) flux = u_tpair.avg @ normal return op.project(dcoll, dd, dd_allfaces, flux) dd_allfaces = as_dofdesc(FACE_RESTR_ALL) if form == "strong": div_u = ( op.local_div(dcoll, u) # No flux terms because u doesn't have inter-el jumps ) elif form == "weak": div_u = op.inverse_mass(dcoll, -op.weak_local_div(dcoll, u) + op.face_mass(dcoll, dd_allfaces, # Note: no boundary flux terms here because u_ext == u_int == 0 sum(get_flux(utpair) for utpair in op.interior_trace_pairs(dcoll, u)) ) ) else: raise ValueError("Invalid form argument.") if vectorize: expected_div_u = make_obj_array([(i+1)*div_f(x) for i in range(dim)]) else: expected_div_u = div_f(x) if visualize: from grudge.shortcuts import make_visualizer vis = make_visualizer(dcoll, vis_order=order if dim == 3 else dim+3) filename = (f"test_divergence_{form}_{dim}_{order}" f"{'_vec' if vectorize else ''}{'_nested' if nested else ''}.vtu") vis.write_vtk_file(filename, [ ("u", u), ("div_u", div_u), ("expected_div_u", expected_div_u), ], overwrite=True) rel_linf_err = actx.to_numpy( op.norm(dcoll, div_u - expected_div_u, np.inf) / op.norm(dcoll, expected_div_u, np.inf)) eoc_rec.add_data_point(1./n, rel_linf_err) print("L^inf error:") print(eoc_rec) assert (eoc_rec.order_estimate() >= order - 0.5 or eoc_rec.max_error() < 1e-11) # }}} # You can test individual routines by typing # $ python test_grudge.py 'test_routine()' if __name__ == "__main__": import sys if len(sys.argv) > 1: exec(sys.argv[1]) else: pytest.main([__file__]) # vim: fdm=marker